Added R and Python versions and package info to README

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Nora Wickelmaier 2024-05-02 18:53:17 +02:00
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README.md
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@ -80,3 +80,158 @@ found clusters of the navigation types were further investigated with
process mining techniques in R (`12_dfgs-case-clusters.R`) and Python
(`13_pm-case-clusters.py`).
# Software versions
## R
The following gives the output of `sessionInfo()` with all relevant
packages attached.
```
R version 4.3.3 (2024-02-29 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19045)
Matrix products: default
locale:
[1] LC_COLLATE=German_Germany.utf8
[2] LC_CTYPE=German_Germany.utf8
[3] LC_MONETARY=German_Germany.utf8
[4] LC_NUMERIC=C
[5] LC_TIME=German_Germany.utf8
time zone: Europe/Berlin
tzcode source: internal
attached base packages:
[1] grid stats graphics grDevices utils
[6] datasets methods base
other attached packages:
[1] igraph_2.0.3 DiagrammeR_1.0.11 partykit_1.2-20
[4] mvtnorm_1.2-4 libcoin_1.0-10 rpart_4.1.23
[7] rgl_1.3.1 smacof_2.1-6 e1071_1.7-14
[10] colorspace_2.1-0 plotrix_3.8-4 vioplot_0.4.0
[13] zoo_1.8-12 sm_2.2-6.0 cluster_2.1.6
[16] factoextra_1.0.7 ggplot2_3.5.0 dplyr_1.1.4
[19] pbapply_1.7-2 petrinetR_0.3.0 processmapR_0.5.3
[22] eventdataR_0.3.1 edeaR_0.9.4 bupaR_0.5.4
[25] lattice_0.22-6 devtools_2.4.5 usethis_2.2.3
[28] mtt_0.0-1
loaded via a namespace (and not attached):
[1] RColorBrewer_1.1-3 rstudioapi_0.16.0
[3] jsonlite_1.8.8 shape_1.4.6.1
[5] magrittr_2.0.3 jomo_2.7-6
[7] nloptr_2.0.3 rmarkdown_2.26
[9] fs_1.6.3 vctrs_0.6.5
[11] heplots_1.6.2 memoise_2.0.1
[13] minqa_1.2.6 base64enc_0.1-3
[15] htmltools_0.5.8.1 forcats_1.0.0
[17] polynom_1.4-1 weights_1.0.4
[19] broom_1.0.5 Formula_1.2-5
[21] mitml_0.4-5 htmlwidgets_1.6.4
[23] plotly_4.10.4 lubridate_1.9.3
[25] cachem_1.0.8 mime_0.12
[27] lifecycle_1.0.4 iterators_1.0.14
[29] pkgconfig_2.0.3 Matrix_1.6-5
[31] R6_2.5.1 fastmap_1.1.1
[33] shiny_1.8.1.1 digest_0.6.35
[35] shinyTime_1.0.3 pkgload_1.3.4
[37] ellipse_0.5.0 Hmisc_5.1-2
[39] fansi_1.0.6 timechange_0.3.0
[41] nnls_1.5 gdata_3.0.0
[43] abind_1.4-5 httr_1.4.7
[45] compiler_4.3.3 proxy_0.4-27
[47] remotes_2.5.0 withr_3.0.0
[49] doParallel_1.0.17 htmlTable_2.4.2
[51] backports_1.4.1 carData_3.0-5
[53] pkgbuild_1.4.4 pan_1.9
[55] MASS_7.3-60.0.1 sessioninfo_1.2.2
[57] gtools_3.9.5 tools_4.3.3
[59] foreign_0.8-86 httpuv_1.6.15
[61] nnet_7.3-19 glue_1.7.0
[63] inum_1.0-5 nlme_3.1-164
[65] promises_1.3.0 checkmate_2.3.1
[67] generics_0.1.3 gtable_0.3.4
[69] class_7.3-22 tidyr_1.3.1
[71] data.table_1.15.4 hms_1.1.3
[73] car_3.1-2 xml2_1.3.6
[75] utf8_1.2.4 ggrepel_0.9.5
[77] foreach_1.5.2 pillar_1.9.0
[79] stringr_1.5.1 later_1.3.2
[81] splines_4.3.3 survival_3.5-8
[83] tidyselect_1.2.1 miniUI_0.1.1.1
[85] knitr_1.46 gridExtra_2.3
[87] xfun_0.43 visNetwork_2.1.2
[89] stringi_1.8.3 lazyeval_0.2.2
[91] boot_1.3-30 evaluate_0.23
[93] codetools_0.2-20 wordcloud_2.6
[95] tibble_3.2.1 cli_3.6.2
[97] xtable_1.8-4 munsell_0.5.1
[99] candisc_0.8-6 Rcpp_1.0.12
[101] parallel_4.3.3 ellipsis_0.3.2
[103] profvis_0.3.8 urlchecker_1.0.1
[105] lme4_1.1-35.3 glmnet_4.1-8
[107] viridisLite_0.4.2 ggthemes_5.1.0
[109] scales_1.3.0 purrr_1.0.2
[111] rlang_1.1.3 mice_3.16.0
```
## Python
The Python version used is `Python 3.12.0`. The following gives the output
of `pip list` for the virtual environment all analyses have been run in.
```
Package Version
----------------- ------------
asttokens 2.4.1
colorama 0.4.6
contourpy 1.2.0
cycler 0.12.1
decorator 5.1.1
deprecation 2.1.0
executing 2.0.1
fonttools 4.46.0
graphviz 0.20.1
intervaltree 3.1.0
ipython 8.18.1
jedi 0.19.1
joblib 1.3.2
kiwisolver 1.4.5
lxml 4.9.3
matplotlib 3.8.2
matplotlib-inline 0.1.6
networkx 3.2.1
numpy 1.26.2
packaging 23.2
pandas 2.1.3
parso 0.8.3
Pillow 10.1.0
pip 24.0
pm4py 2.7.8.4
prompt-toolkit 3.0.41
PuLP 2.8.0
pure-eval 0.2.2
pydotplus 2.0.2
Pygments 2.17.2
pyparsing 3.1.1
python-dateutil 2.8.2
pytz 2023.3.post1
scikit-learn 1.4.0
scipy 1.11.4
six 1.16.0
sortedcontainers 2.4.0
stack-data 0.6.3
StringDist 1.0.9
threadpoolctl 3.2.0
tqdm 4.66.1
traitlets 5.14.0
tzdata 2023.3
wcwidth 0.2.12
```