307 lines
10 KiB
TeX
307 lines
10 KiB
TeX
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\title{Good habits and best practices for effective research data
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management}
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\author{Nora Wickelmaier}
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\date{May 13, 2024}
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\begin{document}
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\begin{frame}{}
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\thispagestyle{empty}
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\titlepage
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\end{frame}
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\section{Introduction}
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\begin{frame}{Habits}
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\begin{quote}
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``In the beginning, creating a new habit is more critical than actually
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achieving a goal.''
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\end{quote}
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\vspace{.5cm}
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Six ideas for building the habits you want
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\begin{enumerate}
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\item Start your habit change process by building awareness
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\item All change begins with making choices
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\item Attach a new habit or behavior to something you already do regularly
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\item Gain clarity about what you want to do and how you will do it
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\item Start with a simple step
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\item Remember the ``why''
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\end{enumerate}
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\vfill
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\flushright{\tiny \url{https://www.psychologytoday.com/us/blog/flourish-and-thrive/202002/6-powerful-ways-build-new-habits}}
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\end{frame}
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\begin{frame}{What habits would help with good data management?}
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\centering
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\includegraphics[width = 5cm]{../figures/QR Code for Methodenseminar SS 2024 - Session 1}
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\url{https://app.sli.do/event/5nyLNFVV2bTHxGVUK1zFEX}
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\end{frame}
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\begin{frame}{The ``why''}
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\centering
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\includegraphics[width = .85\textwidth]{../figures/snafu}
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\url{https://youtu.be/66oNv_DJuPc}
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\end{frame}
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\begin{frame}{The ``why''}
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\begin{columns}
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\begin{column}[c]{.6\textwidth}
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Reproducibility vs.\ replicability:
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{\small
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\renewcommand{\arraystretch}{2.5}
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\begin{tabular}{llc|c|}
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& & \multicolumn{2}{c}{\textbf{Data}} \\
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& & \cellcolor{gray}\textbf{\color{white}Same} &
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\cellcolor{gray}\textbf{\color{white}Different} \\
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\multirow{2}{*}{\textbf{Analysis}} &
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\cellcolor{gray}\textbf{\color{white}Same}
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& \only<2>{\bf \color{red}}Reproducible & Replicable \\
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\cline{2-4}
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& \cellcolor{gray}\textbf{\color{white}Different} & Robust & Generalizable \\
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\cline{2-4}
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\end{tabular}
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}
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\end{column}
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\begin{column}[c]{.4\textwidth}
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Ethical research standards:
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\vspace{1cm}
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\includegraphics[scale = .4]{../figures/2021-06-16_icon_intranet_fair2}
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\end{column}
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\end{columns}
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\vfill
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\flushright{\tiny \url{https://the-turing-way.netlify.app/reproducible-research}}
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\end{frame}
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\begin{frame}{What are possible barriers for good data management?}
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\centering
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\includegraphics[width = 5cm]{../figures/QR Code for Methodenseminar SS 2024 - Session 1}
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\url{https://app.sli.do/event/5nyLNFVV2bTHxGVUK1zFEX}
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\end{frame}
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\begin{frame}[<+->]{Barriers}
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\begin{itemize}
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\item Skills for doing reproducible research are not taught in
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a systematic way
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\item Supervisors are often not doing it
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\item Incentive system does not encourage to spend time on making
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research reproducible (yet!)
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\item Takes time
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\item Takes time
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\item Requires additional skills
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\item Learning these skills is often full of frustrating experiences
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\end{itemize}
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\vfill
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\end{frame}
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\section[Example]{Personal example}
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\begin{frame}{}
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\begin{center}
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\includegraphics[scale = 0.55]{../figures/datenanfrage_phd_thesis}
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\end{center}
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\end{frame}
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\begin{frame}[<+->]{The situation}
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\begin{itemize}
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\item I actually published the data of my first experiment in an R
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package
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\item BUT: He probably wants the data of my second experiment\dots
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\includegraphics[scale = .03]{../figures/seenoevil_monkey}
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\item First try:\\
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\includegraphics[scale = .5]{../figures/phd_data1}
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This does not look good\dots There's not even the actual folder with
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the final data. WTF?
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\item Remembering that I probably moved that to my ``postdoc folder''
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-- but this is not on my work computer, since it is so big\dots OK, I
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will check that at home tonight\dots
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\end{itemize}
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\end{frame}
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\begin{frame}[allowframebreaks]{Getting closer}
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\begin{itemize}
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\item Puh, all the data are on my home computer (only copy,
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though\dots)\\
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\includegraphics[scale = .37]{../figures/phd_data2}
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\item But not really organized\dots\\
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\includegraphics[scale = .18]{../figures/phd_data3}
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\item I check my analysis files and am pretty sure that the files
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\texttt{vp0[1-4]\_finaldata.txt} are the ones I used in the analysis
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in my diss
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\item Checking the files again, I discover that the luminances of my
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stimuli are not in these files -- only the stimulus names I used in
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the experiment, something like \texttt{stim\_1\_7} (pretty
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informative, huh?)
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\item The stimulus files are also in the folder, the one for
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\texttt{stim\_1\_7} looks like this\\
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\includegraphics[scale = .1]{../figures/phd_data4}\\
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(BTW, I investigated the perception of black and white colors in my
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diss)
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\end{itemize}
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\end{frame}
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\begin{frame}{I finally answered this}
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\begin{center}
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\includegraphics[scale = .55]{../figures/phd_data5}
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\end{center}
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\end{frame}
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\begin{frame}{}
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\begin{block}{Exercise}
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\begin{itemize}
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\item Go to \url{https://nextcloud.iwm-tuebingen.de/s/8KoefDc6tZSSMwy}
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and download the data and additional material
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\item Are you able to understand what needs to be done in order to
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use this data based on the information provided?
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\item Write down the steps that need to be taken in order to make
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these data reusable
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\item What kind of skills do we need in order to perform these steps?
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\end{itemize}
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\end{block}
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\end{frame}
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\begin{frame}[fragile]{What I wish I could have answered}
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\begin{verbatim}
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Hello,
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All the data and analyses for my dissertation can be
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found here:
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https://www.mathpsy.uni-tuebingen.de/colorlab/
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Let me know if you need anything else.
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Best wishes,
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Nora
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\end{verbatim}
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\end{frame}
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\begin{frame}[<+->]{What barriers stopped me from doing this?}
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\begin{itemize}
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\item Back then, I did not even consider to publish my data
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\item (I only published the data for the first experiment so I had some
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data in my R package)
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\item Back then, I only wrapped up stuff before switching research
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topics for my postdoc phase
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\item However, I took some time to clean up the files, which allowed me
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to answer the request within one day
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\item I had most of the skills I needed, but nobody who emphasized how
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important it might be to make the data and analysis scripts available
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and reproducible
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\end{itemize}
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\end{frame}
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\section{Upcoming sessions}
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\begin{frame}{What topics would you like to cover this semester?}
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\centering
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\includegraphics[width = 5cm]{../figures/QR Code for Methodenseminar SS 2024 - Session 1}
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\url{https://app.sli.do/event/5nyLNFVV2bTHxGVUK1zFEX}
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\end{frame}
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\begin{frame}{Next week: Workflows}
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\begin{itemize}
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\item Read \citet{Lowndes2017} -- it's eye opening and kinda funny (and
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short!)
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\item Read \citet{Kathawalla2021} -- at least the sections on project
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workflow (p.~4) and sharing data (p.~6)
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\item Consider your current research data management and think about
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what your current workflow is:
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\begin{itemize}
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\item What is going well?
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\item What could be improved?
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\item What could be the benefits of an improved workflow in this
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area?
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\end{itemize}
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\end{itemize}
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\vfill
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\end{frame}
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\begin{frame}[<+->]{Habit building: Get started today}
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\begin{itemize}
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%\item Start your 30 Days of Data Management Habits:
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% https://nextcloud.iwm-tuebingen.de/s/A5HbJZmZ7W5sQjP
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\item Are you ten finger typing, yet? (If not, this is definitely
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something that will improve all of your workflows)
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\item Clean out the folders in your current project; rename the
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files
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%\item Look up note taking and try out some software
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\item Organize your literature folder
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\item Think about smart usage of cloud storage (there are many
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different options at the IWM, there should be one that suits you --
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are you using the one that suits you best?)
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\item Next time you want to e-mail a document, think about a better
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way to share it
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\item Use R Markdown to write your next preregistration
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\item Start reading a book on R and data analysis
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\item Use Git for your next data analysis
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\end{itemize}
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\end{frame}
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\appendix
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%%\begin{frame}[allowframebreaks]{References}
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\begin{frame}{References}
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%\renewcommand{\bibfont}{\small}
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%\bibliographystyle{apacite}
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%\bibliography{../lit}
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\printbibliography
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\vfill
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\end{frame}
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\end{document}
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