Code now also works for 8o8m; adjusted handling of glossar folder, added folder variable, etc.
This commit is contained in:
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7f6e967f7c
commit
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@ -98,7 +98,9 @@ add_trace <- function(data, glossar_dict) {
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subdata2 <- add_trace_artworks(subdata2)
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subdata2 <- add_trace_glossar(subdata2, glossar_dict)
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if ("glossar" %in% unique(subdata2$artwork)) {
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subdata2 <- add_trace_glossar(subdata2, glossar_dict)
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}
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out <- rbind(subdata1, subdata2)
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out <- out[order(out$fileId, out$date, out$timeMs), ]
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@ -7,29 +7,30 @@ close_events <- function(data, event = c("move", "flipCard", "openTopic", "openP
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switch(event,
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"move" = {
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actions <- c("Transform start", "Transform stop")
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idvar <- c("fileId", "eventId", "artwork", "glossar")
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idvar <- c("fileId", "folder", "eventId", "artwork", "glossar")
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drop <- c("popup", "topicNumber", "trace", "event")
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ncol <- 16
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},
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"flipCard" = {
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actions <- c("Show Info", "Show Front")
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idvar <- c("fileId", "trace", "artwork", "glossar")
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idvar <- c("fileId", "folder", "trace", "artwork", "glossar")
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drop <- c("popup", "topicNumber", "eventId", "event")
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ncol <- 16
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},
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"openTopic" = {
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actions <- c("Artwork/OpenCard", "Artwork/CloseCard")
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idvar <- c("fileId", "eventId", "trace", "glossar", "artwork",
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"topicNumber")
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idvar <- c("fileId", "folder", "eventId", "trace", "glossar",
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"artwork", "topicNumber")
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drop <- c("popup", "event")
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ncol <- 18
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},
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"openPopup" = {
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actions <- c("ShowPopup", "HidePopup")
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idvar <- c("fileId", "eventId", "trace", "glossar", "artwork", "popup")
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idvar <- c("fileId", "folder", "eventId", "trace", "glossar",
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"artwork", "popup")
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drop <- c("topicNumber", "event")
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ncol <- 18
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# TODO: Should topicNumber maybe also be filled in for "openPopup"?
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@ -101,13 +102,13 @@ close_events <- function(data, event = c("move", "flipCard", "openTopic", "openP
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data_wide <- move_wide
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}
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out <- data_wide[, c("fileId", "event", "artwork", "trace", "glossar",
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"date.start", "date.stop", "timeMs.start",
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"timeMs.stop", "duration", "topicNumber", "popup",
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"x.start", "y.start", "x.stop", "y.stop",
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"distance", "scale.start", "scale.stop",
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"scaleSize", "rotation.start", "rotation.stop",
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"rotationDegree")]
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out <- data_wide[, c("fileId", "folder", "event", "artwork", "trace",
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"glossar", "date.start", "date.stop",
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"timeMs.start", "timeMs.stop", "duration",
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"topicNumber", "popup", "x.start", "y.start",
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"x.stop", "y.stop", "distance", "scale.start",
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"scale.stop", "scaleSize", "rotation.start",
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"rotation.stop", "rotationDegree")]
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rownames(out) <- NULL
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out
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}
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@ -5,12 +5,14 @@
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#'
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#' @param data Data frame of raw log files created with `parse_logfiles()`.
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#' See `?parse_logfiles` for more details.
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#' @param xmlfiles Vector of names of index files, often something like
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#' `<artwork>.xml`.
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#' @param xmlpath Path to folder where XML definitions of artworks live.
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#' @return Data frame.
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#' @export
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#' @examples
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#' # tbd
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create_eventlogs <- function(data, xmlpath) {
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create_eventlogs <- function(data, xmlfiles, xmlpath) {
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if (!lubridate::is.POSIXt(data$date)){
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cat("########## Convertion variable `date` to POSIXct ##########", "\n")
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@ -25,16 +27,21 @@ create_eventlogs <- function(data, xmlpath) {
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# Create glossar dictionary ##############################################
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cat("\n########## Creating glossar dictionary ##########", "\n")
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artworks <- unique(stats::na.omit(dat$artwork))
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artworks <- artworks[artworks != "glossar"]
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glossar_files <- unique(subset(dat, dat$artwork == "glossar")$popup)
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glossar_dict <- create_glossardict(artworks, glossar_files, path = xmlpath)
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if ("glossar" %in% artworks) {
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artworks <- artworks[artworks != "glossar"]
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glossar_files <- unique(subset(dat, dat$artwork == "glossar")$popup)
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glossar_dict <- create_glossardict(artworks, glossar_files, xmlpath = xmlpath)
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} else {
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glossar_dict <- NULL
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}
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# Add trace variable #####################################################
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cat("\n########## Adding trace variable... ##########", "\n")
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dat1 <- add_trace(dat, glossar_dict)
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# Close events
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cat("\n########## Closing events... ##########", "\n")
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cat("\n\n########## Closing events... ##########", "\n")
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c1 <- close_events(dat1, "move")
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cat("## --> move events closed.", "\n")
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c2 <- close_events(dat1, "flipCard")
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@ -63,7 +70,7 @@ create_eventlogs <- function(data, xmlpath) {
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# Add event ID ###########################################################
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dat3$eventId <- seq_len(nrow(dat3))
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dat3 <- dat3[, c("fileId", "eventId", "case",
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dat3 <- dat3[, c("fileId", "folder", "eventId", "case",
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"trace", "glossar", "event", "artwork",
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"date.start", "date.stop", "timeMs.start",
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"timeMs.stop", "duration", "topicNumber", "popup",
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@ -78,13 +85,13 @@ create_eventlogs <- function(data, xmlpath) {
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# Add topics: file names and topics ######################################
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cat("\n########## Adding information about topics... ##########", "\n\n")
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artworks <- unique(dat4$artwork)
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# remove artworks without XML information
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artworks <- artworks[!artworks %in% c("504", "505")]
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topics <- extract_topics(artworks, pattern = paste0(artworks, ".xml"),
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path = xmlpath)
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#artworks <- artworks[!artworks %in% c("504", "505")]
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# TODO: This is hardcoded! Remove it!
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topics <- extract_topics(artworks, xmlfiles = xmlfiles, xmlpath = xmlpath)
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dat5 <- add_topic(dat4, topics = topics)
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dat5
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}
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@ -1,13 +1,13 @@
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create_glossardict <- function(artworks, glossar_files, path) {
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create_glossardict <- function(artworks, glossar_files, xmlpath) {
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x <- NULL
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for (glossar_file in glossar_files) {
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for (artwork in artworks) {
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fnames <- dir(pattern = paste0(artwork, "_"), path = paste0(path, artwork))
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fnames <- dir(pattern = paste0(artwork, "_"), path = paste0(xmlpath, artwork))
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for (fname in fnames) {
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suppressWarnings(
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lines <- readLines(paste0(path, artwork, "/", fname))
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lines <- readLines(paste0(xmlpath, artwork, "/", fname))
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)
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if (any(grepl(glossar_file, lines))) {
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x <- rbind(x, data.frame(glossar_file, artwork))
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42
R/helper.R
42
R/helper.R
@ -93,50 +93,37 @@ add_trace_subdata <- function(subdata, max_trace) {
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# Create data frame with file names and topics for each artwork
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extract_topics <- function(artworks, pattern, path) {
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extract_topics <- function(artworks, xmlfiles, xmlpath) {
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dat <- NULL
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file_order <- NULL
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out <- NULL
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i <- 1
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for (artwork in artworks) {
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if (length(pattern) == 1) {
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index_file <- pattern
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} else {
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index_file <- pattern[i]
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}
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index_file <- paste0(xmlpath, artwork, "/", xmlfiles[i])
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suppressWarnings(
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fnames <- gsub("^<card src=.*/(.*)./>$", "\\1",
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grep("^<card src=", trimws(readLines(index_file)),
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value = TRUE))
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)
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fnames <- dir(pattern = paste0(artwork, "_"),
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path = paste(path, artwork, sep = "/"))
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topic <- NULL
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for (fname in fnames) {
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suppressWarnings(
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topic <- c(topic, gsub("^<card type=.(.*).>$", "\\1",
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grep("^<card type=",
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trimws(readLines(paste(path, artwork, fname, sep = "/"))),
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trimws(readLines(paste(xmlpath, artwork, fname, sep = "/"))),
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value = T)))
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)
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}
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index <- paste(path, artwork, index_file, sep = "/")
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suppressWarnings(
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file_order <- c(file_order, gsub("^<card src=.*/(.*)./>$", "\\1",
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grep("^<card src=", trimws(readLines(index)),
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value = TRUE)))
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)
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in_index <- fnames %in% file_order
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dat <- rbind(dat, data.frame(artwork, file_name = fnames, in_index, topic))
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out <- rbind(out, data.frame(artwork, file_name = fnames, topic))
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i <- i + 1
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}
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# take only the ones that are actually displayed and sort in the same order
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# as indicated in index.html
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out <- dat[dat$in_index, -3]
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out <- out[order(file_order, out$file_name), ]
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out <- out[order(out$artwork), ]
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rownames(out) <- NULL
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out$index <- unlist(sapply(table(out$artwork), seq_len))
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out$index <- unlist(lapply(table(out$artwork), seq_len))
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out
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}
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@ -188,8 +175,7 @@ add_topic <- function(data, topics) {
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# Create data frame with information on artworks
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extract_artworks <- function(artworks, files = paste0(artworks, ".xml"),
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path = path) {
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extract_artworks <- function(artworks, files, xmlpath) {
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out <- NULL
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i <- 1
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@ -201,7 +187,7 @@ extract_artworks <- function(artworks, files = paste0(artworks, ".xml"),
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index_file <- files[i]
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}
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index <- paste(path, artwork, index_file, sep = "/")
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index <- paste(xmlpath, artwork, index_file, sep = "/")
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varnames <- c("artist", "title", "misc", "description")
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xmllist <- XML::xmlToList(index)$header[varnames]
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@ -1,3 +1,122 @@
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#' Creating data frame from raw log files.
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#'
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#' Creates a data frame or CSV file from raw log files from a
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#' Multi-Touch-Table at the IWM.
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#'
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#' @param folders A character vector of folder names that contain the raw
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#' log files from the Multi-Touch-Table at the IWM.
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#' @param path A path to the folder that contains the folders specified in
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#' first argument. Needs to end in a "/"!
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# TODO: How to catch this?
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#' @param file Name of the file where parsed log files should be saved.
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#' Default is "rawdata_logfiles.csv".
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#' @param save Logical. If data frame should be returned by the function or
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#' saved. Default is TRUE.
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#' @return A data frame or NULL.
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#' @export
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#' @examples
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#' # parse_logfiles("all", path = "../data/haum/haum_logs_2016-2023/")
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parse_logfiles <- function(folders, path, file = "rawdata_logfiles.csv",
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save = FALSE) {
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pbapply::pboptions(style = 3, char = "=")
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# TODO: This is not very intutitive
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fnames <- dir(paste0(path, folders), pattern = "*.log", full.names = TRUE)
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cat(paste0("\n########## Reading ", length(fnames), " log files... ##########"), "\n\n")
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suppressWarnings(
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logs <- pbapply::pblapply(fnames, readLines)
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)
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nlog <- sapply(logs, length)
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dat <- data.frame(fileId = rep(leftpad_fnames(fnames), nlog),
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logs = unlist(logs))
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dat$folder <- rep(sapply(strsplit(fnames, "/"),
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function(x) utils::tail(x, 2)[1]), nlog)
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# Remove corrupt lines
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d1 <- nrow(dat)
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dat <- subset(dat, dat$logs != "")
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d2 <- nrow(dat)
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if(d1 > d2) {
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warning(paste0(d1-d2, " corrupt lines have been found and removed from the data set\n"))
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}
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# Extract relevant infos
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cat("\n########## Parsing individual data parts... ##########", "\n")
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cat("\n Extract dates...", "\n\n")
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date <- pbapply::pbsapply(dat$logs, gsub,
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pattern = "^\\[(.*)\\], \\[.*$",
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replacement = "\\1",
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USE.NAMES = FALSE)
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cat("\n Extract timestamps...", "\n\n")
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timestamp <- pbapply::pbsapply(dat$logs, gsub,
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pattern = "^\\[.*\\], \\[(.*)\\].*$",
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replacement = "\\1",
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USE.NAMES = FALSE)
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cat("\n Extract events...", "\n\n")
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action <- pbapply::pbsapply(dat$logs, gsub,
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pattern = "^.*EyeVisit, (.*):*.*$",
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replacement = "\\1",
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USE.NAMES = FALSE)
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cat("\n Parse separate events...", "\n\n")
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events <- pbapply::pbsapply(strsplit(action, ":"), function(x) x[1])
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cat("\n Extract topics...", "\n\n")
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topics <- pbapply::pbsapply(strsplit(action, ":"), function(x) x[2])
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cat("\n Extract move information...", "\n\n")
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suppressWarnings(
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moves <- pbapply::pbapply(do.call(rbind,
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strsplit(sapply(strsplit(action, ":"),
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function(x) x[3]), ",")), 2,
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as.numeric)
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)
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# ATTENTION: as.numeric() forces NAs for "OpenCard" and "CloseCard"
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cat("\n Extract popups...", "\n\n")
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card_action <- trimws(pbapply::pbsapply(strsplit(action, ":"),
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function(x) x[3])[grep("Artwork", events)])
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card <- as.numeric(pbapply::pbsapply(strsplit(action, ":"),
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function(x) x[4]))
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events[grep("Artwork", events)] <- paste("Artwork", card_action, sep = "/")
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cat("\n Transform timestamps to ms...", "\n\n")
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ts_elements <- strsplit(timestamp, ":")
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time_ms <- as.numeric(sapply(ts_elements, function(x) x[4])) +
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as.numeric(sapply(ts_elements, function(x) x[3])) * 1000 +
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as.numeric(sapply(ts_elements, function(x) x[2])) * 1000 * 60
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dat$date <- lubridate::parse_date_time(date, "bdyHMSOp")
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dat$timeMs <- time_ms
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dat$event <- events
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dat$artwork <- trimws(sapply(strsplit(topics, "/"), function(x) x[1]))
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dat$popup <- sapply(strsplit(topics, "/"), function(x) x[2])
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dat$topicNumber <- card
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dat$x <- moves[,1]
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dat$y <- moves[,2]
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dat$scale <- moves[,3]
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dat$rotation <- moves[,4]
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dat$logs <- NULL
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dat <- dat[order(dat$fileId, dat$date, dat$timeMs), ]
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# Export data
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if (save) {
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cat("Saving data...", "\n\n")
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utils::write.table(dat, file = file, sep = ";", row.names = FALSE)
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cat(paste0("INFORMATION: Data file ", file, " has been written to ", getwd(), "\n\n"))
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} else {
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return(dat)
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}
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}
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#' Left padding file names of raw log files from Multi-Touch-Table at the
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#' IWM.
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#'
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@ -8,7 +127,7 @@
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#' @param fnames File name in the form of `yyyy_mm_dd-hh_mm_ss`, possible
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#' with missing zero left padding.
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#' @return Left padded file names.
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#' @examples
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#' @examples
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#' # folders <- "all"
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#' # dirpaths <- paste0("../data/haum_logs_2016-2023/", folders)
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#' # fnames <- dir(dirpaths, pattern = "*.log", full.names = TRUE)
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@ -36,118 +155,3 @@ leftpad_fnames <- function(fnames) {
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res
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}
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#' Creating data frame from raw log files.
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#'
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#' Creates a data frame or CSV file from raw log files from a
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#' Multi-Touch-Table at the IWM.
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#'
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#' @param folders A character vector of folder names that contain the raw
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#' log files from the Multi-Touch-Table at the IWM.
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#' @param path A path to the folder that contains the folders specified in
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#' first argument. Needs to end in a "/"!
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# TODO: How to catch this?
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#' @param file Name of the file where parsed log files should be saved.
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#' Default is "rawdata_logfiles.csv".
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#' @param save Logical. If data frame should be returned by the function or
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#' saved. Default is TRUE.
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#' @return A data frame or NULL.
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#' @export
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#' @examples
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#' # parse_logfiles("all", path = "../data/haum/haum_logs_2016-2023/")
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parse_logfiles <- function(folders, path, file = "rawdata_logfiles.csv",
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save = TRUE) {
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dirpaths <- paste0(path, folders)
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# TODO: This is not very intutitive
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fnames <- dir(dirpaths, pattern = "*.log", full.names = TRUE)
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cat(paste0("\n########## Reading ", length(fnames), " log files... ##########"), "\n\n")
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suppressWarnings(
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logs <- pbapply::pblapply(fnames, readLines)
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)
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nlog <- sapply(logs, length)
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dat <- data.frame(fileId = rep(leftpad_fnames(fnames), nlog),
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logs = unlist(logs))
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# Remove corrupt lines
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d1 <- nrow(dat)
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dat <- subset(dat, dat$logs != "")
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d2 <- nrow(dat)
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if(d1 > d2) {
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warning(paste0(d1-d2, " corrupt lines have been found and removed from the data set\n"))
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}
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# Extract relevant infos
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cat("\n########## Parsing individual data parts... ##########", "\n")
|
||||
cat("\n Extract dates...", "\n\n")
|
||||
date <- pbapply::pbsapply(dat$logs, gsub,
|
||||
pattern = "^\\[(.*)\\], \\[.*$",
|
||||
replacement = "\\1",
|
||||
USE.NAMES = FALSE)
|
||||
|
||||
cat("\n Extract timestamps...", "\n\n")
|
||||
timestamp <- pbapply::pbsapply(dat$logs, gsub,
|
||||
pattern = "^\\[.*\\], \\[(.*)\\].*$",
|
||||
replacement = "\\1",
|
||||
USE.NAMES = FALSE)
|
||||
|
||||
cat("\n Extract events...", "\n\n")
|
||||
action <- pbapply::pbsapply(dat$logs, gsub,
|
||||
pattern = "^.*EyeVisit, (.*):*.*$",
|
||||
replacement = "\\1",
|
||||
USE.NAMES = FALSE)
|
||||
|
||||
cat("\n Parse separate events...", "\n\n")
|
||||
events <- pbapply::pbsapply(strsplit(action, ":"), function(x) x[1])
|
||||
|
||||
cat("\n Extract topics...", "\n\n")
|
||||
topics <- pbapply::pbsapply(strsplit(action, ":"), function(x) x[2])
|
||||
|
||||
cat("\n Extract move information...", "\n\n")
|
||||
suppressWarnings(
|
||||
moves <- pbapply::pbapply(do.call(rbind,
|
||||
strsplit(sapply(strsplit(action, ":"),
|
||||
function(x) x[3]), ",")), 2,
|
||||
as.numeric)
|
||||
)
|
||||
# ATTENTION: as.numeric() forces NAs for "OpenCard" and "CloseCard"
|
||||
|
||||
cat("\n Extract popups...", "\n\n")
|
||||
card_action <- trimws(pbapply::pbsapply(strsplit(action, ":"),
|
||||
function(x) x[3])[grep("Artwork", events)])
|
||||
|
||||
card <- as.numeric(pbapply::pbsapply(strsplit(action, ":"),
|
||||
function(x) x[4]))
|
||||
|
||||
events[grep("Artwork", events)] <- paste("Artwork", card_action, sep = "/")
|
||||
|
||||
cat("\n Transform timestamps to ms...", "\n\n")
|
||||
ts_elements <- strsplit(timestamp, ":")
|
||||
time_ms <- as.numeric(sapply(ts_elements, function(x) x[4])) +
|
||||
as.numeric(sapply(ts_elements, function(x) x[3])) * 1000 +
|
||||
as.numeric(sapply(ts_elements, function(x) x[2])) * 1000 * 60
|
||||
|
||||
dat$date <- lubridate::parse_date_time(date, "bdyHMSOp")
|
||||
dat$timeMs <- time_ms
|
||||
dat$event <- events
|
||||
dat$artwork <- trimws(sapply(strsplit(topics, "/"), function(x) x[1]))
|
||||
dat$popup <- sapply(strsplit(topics, "/"), function(x) x[2])
|
||||
dat$topicNumber <- card
|
||||
dat$x <- moves[,1]
|
||||
dat$y <- moves[,2]
|
||||
dat$scale <- moves[,3]
|
||||
dat$rotation <- moves[,4]
|
||||
dat$logs <- NULL
|
||||
|
||||
dat <- dat[order(dat$fileId, dat$date, dat$timeMs), ]
|
||||
|
||||
# Export data
|
||||
if (save) {
|
||||
cat("Saving data...", "\n\n")
|
||||
utils::write.table(dat, file = file, sep = ";", row.names = FALSE)
|
||||
cat(paste0("INFORMATION: Data file ", file, " has been written to ", getwd(), "\n\n"))
|
||||
} else {
|
||||
return(dat)
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@ -4,12 +4,15 @@
|
||||
\alias{create_eventlogs}
|
||||
\title{Creating log events from raw log files.}
|
||||
\usage{
|
||||
create_eventlogs(data, xmlpath)
|
||||
create_eventlogs(data, xmlfiles, xmlpath)
|
||||
}
|
||||
\arguments{
|
||||
\item{data}{Data frame of raw log files created with \code{parse_logfiles()}.
|
||||
See \code{?parse_logfiles} for more details.}
|
||||
|
||||
\item{xmlfiles}{Vector of names of index files, often something like
|
||||
\verb{<artwork>.xml}.}
|
||||
|
||||
\item{xmlpath}{Path to folder where XML definitions of artworks live.}
|
||||
}
|
||||
\value{
|
||||
|
||||
@ -4,7 +4,7 @@
|
||||
\alias{parse_logfiles}
|
||||
\title{Creating data frame from raw log files.}
|
||||
\usage{
|
||||
parse_logfiles(folders, path, file = "rawdata_logfiles.csv", save = TRUE)
|
||||
parse_logfiles(folders, path, file = "rawdata_logfiles.csv", save = FALSE)
|
||||
}
|
||||
\arguments{
|
||||
\item{folders}{A character vector of folder names that contain the raw
|
||||
|
||||
6
tests/tests.R
Normal file
6
tests/tests.R
Normal file
@ -0,0 +1,6 @@
|
||||
# Check if traces start with `move` or `flipCard`
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
Loading…
Reference in New Issue
Block a user